October 12, 2016

OICR’s Natalie Fox awarded Philip Feldberg Studentship by Prostate Cancer Canada

Natalie Fox and supporters

Prostate cancer is a complex disease. In a clinical setting it can be hard for doctors to accurately predict outcomes for prostate cancer patients, especially for those deemed to be at an intermediate risk of recurrence. With intermediate risk cancers, unlike those that are high or low risk, it is unclear how the cancer will develop. This makes it difficult to choose exactly the right therapy and avoid unnecessary treatments and their associated side effects.

Continue reading – OICR’s Natalie Fox awarded Philip Feldberg Studentship by Prostate Cancer Canada

July 14, 2016

International team launches community competition to unravel how cancer changes a cell’s RNA

Logos of the Challenge partners

An open challenge that merges the efforts of the International Cancer Genome Consortium, The Cancer Genome Atlas, and the NCI Cloud Pilots with Sage Bionetworks and the open science DREAM Challenge community

Continue reading – International team launches community competition to unravel how cancer changes a cell’s RNA

July 14, 2016

OICR informatics researchers play key role in newly launched Genomic Data Commons

Screenshot of GDC website

Researchers have been given a powerful new tool to search for the mutations behind the development of cancer, leading to a better understanding of the disease, and ultimately, better care for patients. On June 6, U.S. Vice President Joseph Biden announced the launch of the Genomic Data Commons (GDC), an ambitious new project that is making a staggering amount of data available to scientists for analysis while also allowing researchers to share their own data with the wider research community.

Continue reading – OICR informatics researchers play key role in newly launched Genomic Data Commons

July 8, 2016

Bioinformatics.ca is keeping Canadian bioinformaticians at the top of their game

A bioinformatics.ca class.

Since 1999, the Canadian Bioinformatics Workshop series has been training the next generation of Canadian bioinformaticians and helping current bioinformaticians keep their skills up to date. This year’s series is well underway with a summer session of classes in Toronto and Vancouver recently wrapped and another session set to launch in the fall. The bioinformatics.ca workshop series is funded by registration fees paid by participants, led by OICR’s Francis Ouellette and facilitated by staff at OICR, including Ann Meyer, Manager, Knowledge and Research Exchange. We spoke to Ann about the series, why it is necessary and what the next steps for bioinformatics.ca will be.

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June 16, 2016

OICR-developed software helping track Zika in Brazil

Field Laboratory tracking Zika
Photo: University of Birmingham

Scientists from the University of Birmingham in the U.K. have established a mobile DNA sequencing lab in Brazil to help that country track the spread of the Zika virus. The lab, based inside a minibus, is travelling through the areas of Brazil that have been most affected. A central part of the technology they are using is the small, USB-powered MinION genome sequencer. OICR’s Dr. Jared Simpson, an Investigator in the Informatics and Bio-computing Program, developed the software used to sequence samples on the device.

Read the news release: Mobile laboratories help track Zika spread across Brazil

Related: Tracking Ebola with portable sequencers: Could this technology be the key monitoring the spread of Zika?